Section: Dissemination

Promoting Scientific Activities

Scientific Events Selection

Member of the Conference Program Committees

• Grégory Batt was member of the program committees of:

  • FOSBE'16 6th IFAC Conference on Foundations of Systems Biology in Engineering, Laboratory for Systems Theory and Automatic Control, Otto von Guericke University, Magdeburg, Germany, 9th - 12th October 2016.

  • CMSB'16 14th International Conference on Computational Methods in Systems Biology, Computer Laboratory, University of Cambridge, UK, 21st - 23rd September 2016.

  • HSB'16 5th international workshop on Hybrid Systems Biology, Grenoble, October 20-21, 2016.

• François Fages was member of the program committees of:

  • CIE'16 Computability in Europe, Paris, 2016.

  • CMSB'16 14th International Conference on Computational Methods in Systems Biology, Computer Laboratory, University of Cambridge, UK, 21st - 23rd September 2016.

  • CP'16 22nd International Conference on Principles and Practice of Constraint Programming, Toulouse, France, September 5-9, 2016.

  • HSB'16 5th international workshop on Hybrid Systems Biology, Grenoble, October 20-21, 2016.

  • IJCAI'16 25th International Joint Conference on Artificial Intelligence, New York, 2016.

  • SASB'16 The Seventh International Workshop on Static Analysis and Systems Biology, September 8–10, 2016, Edinburgh, UK

  • WCB'16 12th International Workshop on Constraint-Based Methods for Bioinformatics, Toulouse, 2016.

• Sylvain Soliman was member of the program committees of:

  • CP'16 22nd International Conference on Principles and Practice of Constraint Programming, Toulouse, France, September 5-9, 2016.

  • WCB'16 12th International Workshop on Constraint-Based Methods for Bioinformatics, Toulouse, 2016.

• Sucheendra K. Palaniappan was member of the program committee of Formal Methods for Biological and Biomedical Systems (FMBBS 2016), Shenzhen, China, December 2016.

Journal

Member of the Editorial Boards

François Fages is member of

• the Editorial Board of the Computer Science area of the Royal Society Open Science journal since 2014,

• the Editorial Board of the journal RAIRO OR Operations Research since 2004.

Reviewer - Reviewing Activities

Beyond their Editorial Board and Program Committee duties,

• Grégory Batt reviewed an article for ACS Synthetic Biology

• François Fages reviewed articles for BMC Systems Biology, Fundamenta Informaticae, BioSystems, PLOS-One and Computers and Industrial Engineering.

• Sylvain Soliman reviewed articles for BMC Systems Biology, BioSystems and AMS Math Reviews.

Invited Talks

• François Fages gave invited talks at

  • Workshop on Symbolic Computation for Biological Systems, “Biochemical Programs and Mixed Analog-Digital Algorithms in the Cell”, Univ. Bonn, 22 November 2016

  • Bilille scientific day on Systems Biology, “Biochemical Programs and Mixed Analog-Digital Algorithms in the Cell”, Univ. Lille, 15 November 2016,

  • Colloque de Cérisy, Sciences de la vie, science de l'information, “Biochemical Programs and Mixed Analog-Digital Algorithms in the Cell”, 20 September 2016,

  • Workshop on Formal Verification of Real-Time Systems, “Continuous Valuations of Temporal Logic Specifications with applications to Parameter Optimization and Robustness Measures”, ENSTA Brest, 28 June 2016,

  • Workshop on Verification of Biological Systems, “Hybrid Analog/Digital Computation with Biochemical Reaction Systems”, ENS Cachan, 17 May 2016,

  • International Worskhop on Entropy and Information, “Digital/Analog Computation in the Cell”, Univ Paris-Diderot, 9 May 2016.

  • GT TheorBio, “Computational Systems Biology and Optimization”, Orsay, 9 Février 2016.

• Grégory Batt gave invited talks at

  • Seminar at Systems Biology group, Clinical Pharmacology, Roche Pharma Research, on “Multi-scale modeling of TRAIL-induced apoptosis”, March 2016, Basel

  • Seminar at Control Theory and Systems Biology Lab, Department of Biosystems Science and Engineering, ETHZ, on “Multi-scale modeling of TRAIL-induced apoptosis”, March 2016, Basel

  • Journées Inria Cancer, Modeling dynamics of cell-to-cell variability in TRAIL-induced apoptosis explains fractional killing and predicts reversible resistance, March 2016, Paris

  • Third International Workshop on Synthesis of Complex Parameters, “What population reveals about individual cell identity: Single-cell parameter estimation of models of gene expression in yeast”, April 2016, Eindhoven

  • Open University: systèmes hybrides et systèmes biologiques, “Predicting long-term effects of apoptosis-inducing drug treatments”, May 2016, ENS Cachan, France

  • Journées scientifiques Inria, “What population reveals about individual cell identity: Single-cell parameter estimation of models of gene expression in yeast”, June 2016, Rennes

  • Second Conference of the French Research Group on Synthetic Biology, “Balancing a genetic toggle switch by real-time control or periodic stimulations”, June 2016, Bordeaux

  • Second Conference of the French Research Group on Symbolic Systems Biology, “Multi-scale modeling of TRAIL-induced apoptosis”, July 2016, Lyon

  • Pasteur Quantitative Biology Symposium, “Balancing a genetic toggle switch by real-time control or periodic stimulations”, Oct 2016, Paris

  • Bilille scientific day on Systems Biology, “Balancing a genetic toggle switch by real-time control or periodic stimulations”, Nov 2016, Lille

• Jakob Ruess gave invited talks at

  • Dracula seminar, “Towards real-time in vivo mathematical biology at the level of single cells”, Nov 2016, Lyon

Leadership within the Scientific Community

• Grégory Batt is a member of

  • the IEEE/CSS Technical Committee on Systems Biology,

  • the scientific board of the GDR de Biologie de Synthèse et des Systèmes

  • the GDR de Bioinformatique Moléculaire, in charge of the axis on Biological network modelling, systems biology and synthetic biology

  • co-animator of the French working group on Symbolic Systems Biology GT BIOSS

• François Fages is a member of

  • the Steering Committee of the International Conference on Computational Methods for Systems Biology since 2008,

  • the Scientific Council of the Doctorate School “Frontières Du Vivant” at Center for Research and Interdisciplanirity, Universities Paris Descartes and Paris Diderot, since 2010,

  • The Scientific Commmittee of the Summer School Ecole Thématique Modélisation Formelle des Réseaux de Régulation Biologique since 2010.

Scientific Expertise

François Fages

• is a member of the jury for the Prix de thèse Gilles Kahn of the Société Informatique de France, since 2015,

• reviewed one research project for the Israel Science Foundation.

Grégory Batt has been a member of the selection committee for Junior research scientists (CR2) at Inria Rennes - Bretagne Atlantique in 2016.

Research Administration

François Fages is member of the “Bureau du Comité des Projets” of Inria Saclay-IdF.

Sylvain Soliman is member of

• the “Commission Scientifique” of Inria Saclay-IdF

• and of the AAP Digiteo/Digicosme Ph.D. grant jury.